diff --git a/README.md b/README.md index c06861c93259b67d50b3f50a3fc8f3953d49adcc..1d4ced3af051dd6de088d5a9e441570a3b19227e 100644 --- a/README.md +++ b/README.md @@ -36,10 +36,10 @@ The Alya System is a Computational Mechanics code capable of solving different p - Web site: https://www.bsc.es/computer-applications/alya-system - Code download: http://www.prace-ri.eu/UEABS/ALYA/1.1/alya3226.tar.gz -- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/alya/ALYA_Build_README.txt +- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/alya/ALYA_Build_README.txt - Test Case A: http://www.prace-ri.eu/UEABS/ALYA/1.1/ALYA_TestCaseA.tar.gz - Test Case B: http://www.prace-ri.eu/UEABS/ALYA/1.1/ALYA_TestCaseB.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/alya/ALYA_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/alya/ALYA_Run_README.txt # Code_Saturne @@ -53,7 +53,7 @@ Code_Saturne® is based on a co-located finite volume approach that can hand - Build instructions: http://code-saturne.org/cms/documentation/guides/installation - Test Case A: http://www.prace-ri.eu/UEABS/Code_Saturne/Code_Saturne_TestCaseA.tar.gz - Test Case B: http://www.prace-ri.eu/UEABS/Code_Saturne/1.1/Code_Saturne_TestCaseB.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/code_saturne/Code_Saturne_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/code_saturne/Code_Saturne_README.txt # CP2K @@ -63,10 +63,10 @@ CP2K provides state-of-the-art methods for efficient and accurate atomistic simu - Web site: https://www.cp2k.org/ - Code download: https://www.cp2k.org/download -- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/cp2k/CP2K_Build_README.txt +- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/cp2k/CP2K_Build_README.txt - Test Case A: http://www.prace-ri.eu/UEABS/CP2K/CP2K_TestCaseA.tar.gz - Test Case B: http://www.prace-ri.eu/UEABS/CP2K/CP2K_TestCaseB.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/cp2k/CP2K_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/cp2k/CP2K_Run_README.txt # GADGET @@ -75,9 +75,9 @@ GADGET is a freely available code for cosmological N-body/SPH simulations on mas - Web site: http://www.mpa-garching.mpg.de/gadget/ - Code download: http://www.prace-ri.eu/UEABS/GADGET/gadget3_Source.tar.gz - Disclaimer: please note that by downloading the code from this website, you agree to be bound by the terms of the GPL license. -- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/gadget/gadget3_Build_README.txt +- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/gadget/gadget3_Build_README.txt - Test Case A: http://www.prace-ri.eu/UEABS/GADGET/gadget3_TestCaseA.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/gadget/gadget3_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/gadget/gadget3_Run_README.txt # GENE @@ -92,7 +92,7 @@ The GENE code is written in Fortran 90 and C and is parallelized with pure MPI. - Build instructions: included with code download - Test Case A: included with code download - Test Case B: included with code download -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/gene/GENE_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/gene/GENE_Run_README.txt # GPAW @@ -107,9 +107,9 @@ The program offers several parallelization levels. The most basic parallelizatio - Web site: https://wiki.fysik.dtu.dk/gpaw/ - Code download: https://gitlab.com/gpaw/gpaw -- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/gpaw/GPAW_Build_README.txt +- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/gpaw/GPAW_Build_README.txt - Test Case A: http://www.prace-ri.eu/UEABS/GPAW/1.1/GPAW_benchmark.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/gpaw/GPAW_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/gpaw/GPAW_Run_README.txt # GROMACS @@ -140,7 +140,7 @@ Instructions: - Code download: http://www.gromacs.org/Downloads The UEABS benchmark cases require the use of 5.1.x or newer branch: the latest 2016 version is suggested. - Test Case A: http://www.prace-ri.eu/UEABS/GROMACS/GROMACS_TestCaseA.tar.gz - Test Case B: http://www.prace-ri.eu/UEABS/GROMACS/GROMACS_TestCaseB.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/gromacs/GROMACS_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/gromacs/GROMACS_Run_README.txt # NAMD @@ -155,11 +155,11 @@ Deployment areas of NAMD include pharmaceutical research by academic and industr NAMD is written in C++ and parallelised using Charm++ parallel objects, which are implemented on top of MPI. - Web site: http://www.ks.uiuc.edu/Research/namd/ -- Code download: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/namd/NAMD_Download_README.txt -- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/namd/NAMD_Build_README.txt +- Code download: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/namd/NAMD_Download_README.txt +- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/namd/NAMD_Build_README.txt - Test Case A: http://www.prace-ri.eu/UEABS/NAMD/NAMD_TestCaseA.tar.gz - Test Case B: http://www.prace-ri.eu/UEABS/NAMD/NAMD_TestCaseB.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/namd/NAMD_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/namd/NAMD_Run_README.txt # NEMO @@ -178,9 +178,9 @@ NEMO is used by a large community: 240 projects in 27 countries (14 in Europe, 1 - Web site: http://www.nemo-ocean.eu/ - Code download: http://www.prace-ri.eu/UEABS/NEMO/NEMO_Source.tar.gz - Disclaimer: please note that by downloading the code from this website, you agree to be bound by the terms of the GPL license. -- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/nemo/NEMO_Build_README.txt +- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/nemo/NEMO_Build_README.txt - Test Case A: http://www.prace-ri.eu/UEABS/NEMO/NEMO_TestCaseA.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/nemo/NEMO_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/nemo/NEMO_Run_README.txt # QCD @@ -199,9 +199,9 @@ Kernel D consists of the core matrix-vector multiplication routine for standard Kernel E consists of a full conjugate gradient solution using Wilson fermions. Lattice size is 643 x 3. - Code download: http://www.prace-ri.eu/UEABS/QCD/QCD_Source_TestCaseA.tar.gz -- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/qcd/QCD_Build_README.txt +- Build instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/qcd/QCD_Build_README.txt - Test Case A: included with source download -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/qcd/QCD_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/qcd/QCD_Run_README.txt # Quantum Espresso @@ -215,7 +215,7 @@ QUANTUM ESPRESSO is written mostly in Fortran90, and parallelised using MPI and - Build instructions: http://www.quantum-espresso.org/wp-content/uploads/Doc/user_guide/ - Test Case A: http://www.prace-ri.eu/UEABS/Quantum_Espresso/QuantumEspresso_TestCaseA.tar.gz - Test Case B: http://www.prace-ri.eu/UEABS/Quantum_Espresso/QuantumEspresso_TestCaseB.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/quantum_espresso/QuantumEspresso_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/quantum_espresso/QuantumEspresso_Run_README.txt # SPECFEM3D @@ -230,4 +230,4 @@ In many geological models in the context of seismic wave propagation studies (ex - Build instructions: http://www.geodynamics.org/wsvn/cig/seismo/3D/SPECFEM3D_GLOBE/trunk/doc/USER_MANUAL/manual_SPECFEM3D_GLOBE.pdf?op=file&rev=0&sc=0 - Test Case A: http://www.prace-ri.eu/UEABS/SPECFEM3D/SPECFEM3D_TestCaseA.tar.gz - Test Case B: http://www.prace-ri.eu/UEABS/SPECFEM3D/SPECFEM3D_TestCaseA.tar.gz -- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/v1.1/specfem3d/SPECFEM3D_Run_README.txt +- Run instructions: https://repository.prace-ri.eu/git/UEABS/ueabs/blob/r1.1/specfem3d/SPECFEM3D_Run_README.txt