Update compile script for GPU

specfem3d/compile.sh

@@ -4,6 +4,8 @@ echo "==> Choose supercomputer :"
 echo "     - occigen"
 echo "     - marenostrum "
 echo "     - marconi-knl "
+echo "     - daint-gpu "
+echo "     - daint-cpu "
 read machine
 
 source ./env/env_${machine}
@@ -37,17 +39,37 @@ Install(){
     done
     if [ $answer = "1" ]; then
         echo "===> Copy test case A"
-        tar zxvf SPECFEM3D_TestCaseA.tar.gz
+        tar zxvf $HOME/tarballs/SPECFEM3D_TestCaseA.tar.gz
+	export install_dir=$install_dir/TestCaseA
+	mkdir -p $install_dir
+	mv $install_dir/../specfem3d_globe  $install_dir/.
         cp SPECFEM3D_TestCaseA/* $install_dir/specfem3d_globe/DATA/.
         rm -rf SPECFEM3D_TestCaseA
     else
         echo "===> Copy test case B"
-        tar zxvf SPECFEM3D_TestCaseB.tar.gz
+	export install_dir=$install_dir/TestCaseB
+	mkdir -p $install_dir
+	mv $install_dir/../specfem3d_globe  $install_dir/.
+        tar zxvf $HOME/tarballs/SPECFEM3D_TestCaseB.tar.gz
         cp SPECFEM3D_TestCaseB/* $install_dir/specfem3d_globe/DATA/.
         rm -rf SPECFEM3D_TestCaseB
     fi
     cd $install_dir/specfem3d_globe
+    if [ $machine = "daint-gpu" ]; then
+	echo "Configure for CPU+GPU system"
+	### replace `use mpi` if needed ###
+	#cd utils
+ 	#perl replace_use_mpi_with_include_mpif_dot_h.pl
+ 	#cd ..
+	sed -i s/"GPU_MODE                        = .false."/"GPU_MODE                        = .true."/g  $install_dir/specfem3d_globe/DATA/Par_file
+	export MPI_INC=$MPICH_DIR/include
+	export CUDA_LIB="$CUDATOOLKIT_HOME/lib64"
+	export CUDA_INC="$CUDATOOLKIT_HOME/include"
+	./configure --build=ppc64 --with-cuda=cuda5
+    else
+	echo "Configure for CPU only system"
         ./configure  --enable-openmp
+    fi
     echo $machine
     #if [ $machine = "occigen" ] || [ $machine = "marenostrum" ] || [ $machine = "marconi-knl" ];then
     #    echo "===> Edit Par_file (MemPerCor=50... )"
@@ -59,7 +81,7 @@ Install(){
 
 Deploy(){
     echo "install_dir ="$install_dir
-    if [ $machine = "occigen" ] || [ $machine = "marenostrum" ] || [ $machine = "marconi-knl" ];then
+    if [ $machine = "occigen" ] || [ $machine = "marenostrum" ] || [ $machine = "marconi-knl" ] || [ $machine = "daint-cpu" ] || [ $machine = "daint-gpu" ];then
         echo "==> Install on $machine :"
         if [ ! -z "$install_dir" ] && [ -d $install_dir ];then
             echo "==> Clean installation directory"