#!/bin/bash #MSUB -A pa4674 #MSUB -q skylake #MSUB -r specfem3D_test_case_A #MSUB -N 24 #MSUB -n 96 # Number of tasks to use #MSUB -c 12 # Number of threads per task to use #MSUB -o specfem3D_test_case_A_irene-skl-%I.output #MSUB -T 5400 #set -e source ../env/env_irene-skl cd $install_dir/TestCaseA/specfem3d_globe export I_MPI_DOMAIN=auto export I_MPI_PIN_RESPECT_CPUSET=0 export I_MPI_DEBUG=4 #Make sure that OMP_NUM_THREADS / KMP_HW_SUBSET = cpus-per-task export KMP_HW_SUBSET=1T export OMP_NUM_THREADS=12 ulimit -s unlimited MESHER_EXE=./bin/xmeshfem3D SOLVER_EXE=./bin/xspecfem3D # backup files used for this simulation cp DATA/Par_file OUTPUT_FILES/ cp DATA/STATIONS OUTPUT_FILES/ cp DATA/CMTSOLUTION OUTPUT_FILES/ ## ## mesh generation ## sleep 2 echo echo `date` echo "starting MPI mesher" echo MPI_PROCESS=96 #` echo "$SLURM_NNODES*$SLURM_NTASKS_PER_NODE" | bc -l` echo "OMP_NUM_THREADS=$OMP_NUM_THREADS" time ccc_mprun -n ${MPI_PROCESS} ${MESHER_EXE} echo " mesher done: `date`" echo ## ## forward simulation ## sleep 2 echo echo `date` echo starting run in current directory $PWD echo time ccc_mprun -n ${MPI_PROCESS} ${SOLVER_EXE} echo "finished successfully" echo `date`