#!/bin/bash #SBATCH -J Validation_case_specfem-Marconi100_small_benchmark_run_to_test_more_complex_Earth #SBATCH -A Ppp4x_5850 #SBATCH -p m100_usr_prod #SBATCH --nodes=1 #SBATCH --ntasks-per-node=24 # 24 tasks out of 128 #SBATCH --cpus-per-task=4 #SBATCH --time=01:59:59 #SBATCH --output Validation_case_specfem-Marconi100_small_benchmark_run_to_test_more_complex_Earth-xl-spectrumpi-mpirun-GPU_DEVICE-star-%j.out #SBATCH --gres=gpu:4 # 1 gpus per node out of 4 ##SBATCH --hint=nomultithread #SBATCH --exclusive #SBATCH --mem=246000 # memory per node out of 246000MB #set -e source ../env/env_marconi100 echo "Environment used:" echo "=================" grep -E -v '^(#|$)' ../env/env_marconi100 cat job_marconi100_small_benchmark_run_to_test_more_complex_Earth.slurm cd $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth export CUDA_VISIBLE_DEVICES=0,1,2,3 # Uncomment the 3-5 following lines if it's first time launched after the compilation: sed -i s/"GPU_MODE = .false."/"GPU_MODE = .true."/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/DATA/Par_file sed -i s/"GPU_DEVICE = Tesla"/"GPU_DEVICE = *"/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/DATA/Par_file sed -i s/"configure --enable-openmp"/"configure --build=ppc64 --with-cuda=cuda8"/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_this_example.sh #sed -i s/"mpirun -np"/"srun -n"/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_mesher_solver.bash sed -i s/"mpirun -np"/"mpirun -gpu -np"/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_mesher_solver.bash sed -i '38d' $install_dir/specfem3d_globe/Makefile grep configure $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_this_example.sh #export OMP_NUM_THREADS=1 # $SLURM_CPUS_PER_TASK ulimit -s unlimited sed -i '40 i sed -i s/"O4"/"O3"/g Makefile' $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_this_example.sh time ./run_this_example.sh grep GPU $install_dir/specfem3d_globe/DATA/Par_file echo "==========" echo "config.log" echo "==========" cat $install_dir/specfem3d_globe/config.log echo "========" echo "make.log" echo "========" cat $install_dir/specfem3d_globe/make.log echo "running seismogram comparisons:" echo cd $install_dir/specfem3d_globe/ # uncompress seismograms if [ -e EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES_reference_OK/II.AAK.MXE.sem.ascii.bz2 ]; then echo echo "unzipping references..." echo mkdir OUTPUT_FILES_reference_OK/ bunzip2 EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES_reference_OK/*.bz2 echo echo fi # compares seismograms by plotting correlations # Python2 (2.7 -virtual env - numpy) source /m100/home/userexternal/cjourdai/numpy-test/bin/activate which python ./utils/compare_seismogram_correlations.py EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES/ EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES_reference_OK/ echo echo "done" echo echo "========" cat $install_dir//specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES/output_solver.txt echo "========" cat $install_dir//specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES/output_mesher.txt