Newer
Older
#!/bin/bash
echo "==> Choose supercomputer :"
echo " - occigen"
echo " - marenostrum "
echo " - marconi-knl "
echo " - irene-skl "
echo " - irene-knl "
echo " - dibona "
read machine
source ./env/env_${machine}
Untar(){
echo "==> Untar "
#Clone the repository
cd $install_dir
git -c http.sslVerify=false clone https://github.com/geodynamics/specfem3d_globe.git
cd specfem3d_globe/
git checkout b1d6ba966496f269611eff8c2cf1f22bcdac2bd9
#Copy sources
#source_dir=$HOME/git/specfem3d_globe
#echo "Copy source"
#cp -r $source_dir $install_dir
cd $ueabs_dir
}
Install(){
echo "===> Configure "
answer=0
echo "1. Test Case A is designed to run on Tier-1 sized systems (up to around 1,000 x86 cores, or equivalent)"
echo "2. Test Case B is designed to run on Tier-0 sized systems (up to around 10,000 x86 cores, or equivalent)"
echo "3. Test Case C is designed to run on 1 or 2 node(s)"
if [[ $answer -eq 1 || $answer -eq 2 || $answer -eq 3 ]]; then break;fi
done
if [ $answer = "1" ]; then
echo "===> Copy test case A"
tar zxvf $HOME/tarballs/SPECFEM3D_TestCaseA.tar.gz
export install_dir=$install_dir/TestCaseA
mkdir -p $install_dir
mv $install_dir/../specfem3d_globe $install_dir/.
cp SPECFEM3D_TestCaseA/* $install_dir/specfem3d_globe/DATA/.
rm -rf SPECFEM3D_TestCaseA
export install_dir=$install_dir/TestCaseB
mkdir -p $install_dir
mv $install_dir/../specfem3d_globe $install_dir/.
tar zxvf $HOME/tarballs/SPECFEM3D_TestCaseB.tar.gz
cp SPECFEM3D_TestCaseB/* $install_dir/specfem3d_globe/DATA/.
rm -rf SPECFEM3D_TestCaseB
else
echo "===> Copy test case C"
export install_dir=$install_dir/TestCaseC
mkdir -p $install_dir
mv $install_dir/../specfem3d_globe $install_dir/.
cp $ueabs_dir/test_cases/SPECFEM3D_TestCaseC/* $install_dir/specfem3d_globe/DATA/.
if [ $machine = "daint-gpu" ] || [ $machine = "davide" ]; then
echo "Configure for CPU+GPU system"
### replace `use mpi` if needed ###
#cd utils
#perl replace_use_mpi_with_include_mpif_dot_h.pl
#cd ..
sed -i s/"GPU_MODE = .false."/"GPU_MODE = .true."/g $install_dir/specfem3d_globe/DATA/Par_file
if [ $machine = "daint-gpu" ];then
export MPI_INC=$MPICH_DIR/include
export CUDA_LIB="$CUDATOOLKIT_HOME/lib64"
export CUDA_INC="$CUDATOOLKIT_HOME/include"
fi
./configure --build=ppc64 --with-cuda=cuda5
else
echo "Configure for CPU only system"
./configure --enable-openmp
fi
echo $machine
#if [ $machine = "occigen" ] || [ $machine = "marenostrum" ] || [ $machine = "marconi-knl" ];then
# echo "===> Edit Par_file (MemPerCor=50... )"
# sed -i s/"MEMORY_INSTALLED_PER_CORE_IN_GB = 2.5d0"/"MEMORY_INSTALLED_PER_CORE_IN_GB = 50d0"/g DATA/Par_file
#fi
echo "===> Build"
time -p make -j 12 all >& make.log &
}
Clean(){
if [ ! -z "$install_dir" ] && [ -d $install_dir ];then
echo "==> Clean installation directory"
do
echo "===> Choose Test Case to delete : (1, 2, 3)"
echo "1 : $install_dir/TestCaseA"
echo "2 : $install_dir/TestCaseB"
echo "3 : $install_dir/TestCaseC"
read answer
if [[ $answer -eq 1 || $answer -eq 2 || $answer -eq 3 ]]; then break;fi
done
if [ $answer = "1" ]; then
rm -rf $install_dir/TestCaseA
elif [ $answer = "2" ]; then
rm -rf $install_dir/TestCaseB
else
rm -rf $install_dir/TestCaseC
fi
else
echo "Error with install_dir variable"
exit
fi
}
Deploy(){
echo "install_dir ="$install_dir
if [ $machine = "occigen" ] || [ $machine = "marenostrum" ] || [ $machine = "marconi-knl" ] || [ $machine = "daint-cpu-only" ] || [ $machine = "daint-gpu" ] || [ $machine = "davide" ] || [ $machine = "juwels" ] || [ $machine = "irene-skl" ] || [ $machine = "irene-knl" ] || [ $machine = "dibona" ] || [ $machine = "frioul" ];then
Install
else
echo "Wrong machine !"
exit
fi
}
Deploy