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db1b4481
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db1b4481
authored
2 years ago
by
Miguel Avillez
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Update gadget/4.0/README.md
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db1b4481
...
@@ -146,18 +146,20 @@ sbatch slurm_script.sh
...
@@ -146,18 +146,20 @@ sbatch slurm_script.sh
where the slurm_script.sh has the form (for a run with 1024 cores):
where the slurm_script.sh has the form (for a run with 1024 cores):
```
```
#!/bin/bash
-l
#!/bin/bash
#SBATCH --time=0
1
:00:00
#SBATCH --time=0
2
:00:00
#SBATCH --account=
ACCOUNT
#SBATCH --account=
XXXXX
#SBATCH --job-name=
collgal-01024
#SBATCH --job-name=
DM_L50-N512
#SBATCH --output=g_
collgal_
%j.out
#SBATCH --output=g_%j.out
#SBATCH --error=g_
collgal_
%j.error
#SBATCH --error=g_%j.error
#SBATCH --nodes=32
#SBATCH --nodes=32
#SBATCH --ntasks=1056
#SBATCH --cpus-per-task=1
#SBATCH --cpus-per-task=1
#SBATCH --ntasks-per-socket=17
#SBATCH --ntasks-per-socket=17
#SBATCH --
n
tasks-per-node=33
#SBATCH --tasks-per-node=33
#SBATCH --exclusive
#SBATCH --exclusive
#SBATCH --partition=batch
#SBATCH --qos=prace
#SBATCH --workdir=.
echo
echo
echo
"Running on hosts:
$SLURM_NODELIST
"
echo
"Running on hosts:
$SLURM_NODELIST
"
...
@@ -166,8 +168,9 @@ echo "Running on $SLURM_NPROCS processors."
...
@@ -166,8 +168,9 @@ echo "Running on $SLURM_NPROCS processors."
echo
"Current working directory is
`
pwd
`
"
echo
"Current working directory is
`
pwd
`
"
echo
echo
srun ./gadget4
-
exe param.txt
srun ./gadget4
_
exe param.txt
```
```
Where:
Where:
*
gadget4-exe is the executable.
*
gadget4-exe is the executable.
*
param.txt is the input parameter file.
*
param.txt is the input parameter file.
...
@@ -181,10 +184,9 @@ must allocate 33 cores per compute node. For a run with 1024 cores in 32 nodes w
...
@@ -181,10 +184,9 @@ must allocate 33 cores per compute node. For a run with 1024 cores in 32 nodes w
##### OUTPUT of a run with 1024 cores
##### OUTPUT of a run with 1024 cores
```
```
Running on hosts: jwc03n[082-097,169-184]
Running on 32 nodes.
Running on 32 nodes.
Running on 1056 processors.
Running on 1056 processors.
Current working directory is
Test-Case-A
Current working directory is
XXXXXXXXX
Shared memory islands host a minimum of 33 and a maximum of 33 MPI ranks.
Shared memory islands host a minimum of 33 and a maximum of 33 MPI ranks.
We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node).
We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node).
...
@@ -197,20 +199,26 @@ We shall use 32 MPI ranks in total for assisting one-sided communication (1 per
...
@@ -197,20 +199,26 @@ We shall use 32 MPI ranks in total for assisting one-sided communication (1 per
This is Gadget, version 4.0.
This is Gadget, version 4.0.
Git commit 8ee7f358cf43a37955018f64404db191798a32a3, Tue Jun 15 15:10:36 2021 +0200
Git commit 8ee7f358cf43a37955018f64404db191798a32a3, Tue Jun 15 15:10:36 2021 +0200
Code was compiled with the following compiler and flags:
...
...
Code was compiled with the following settings:
Code was compiled with the following settings:
COOLING
ASMTH=2.0
DOUBLEPRECISION=1
CREATE_GRID
GADGET2_HEADER
DOUBLEPRECISION=2
MULTIPOLE_ORDER=3
FOF
NSOFTCLASSES=2
IDS_32BIT
NTYPES=6
LEAN
POSITIONS_IN_64BIT
NGENIC=512
NGENIC_2LPT
NSOFTCLASSES=1
NTYPES=2
PERIODIC
PMGRID=768
POSITIONS_IN_32BIT
POWERSPEC_ON_OUTPUT
RANDOMIZE_DOMAINCENTER
SELFGRAVITY
SELFGRAVITY
STARFORMATION
TREEPM_NOTIMESPLIT
TREE_NUM_BEFORE_NODESPLIT=4
Running on 1024 MPI tasks.
Running on 1024 MPI tasks.
...
...
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