Add validation case for marconi100

specfem3d/job_script/job_marconi100_small_benchmark_run_to_test_more_complex_Earth.slurm

+#!/bin/bash
+#SBATCH -J Validation_case_specfem-Marconi100_small_benchmark_run_to_test_more_complex_Earth
+#SBATCH -A Ppp4x_5850
+#SBATCH -p m100_usr_prod
+#SBATCH --nodes=1
+#SBATCH --ntasks-per-node=24 # 24 tasks out of 128
+#SBATCH --cpus-per-task=4
+#SBATCH --time=01:59:59
+#SBATCH --output Validation_case_specfem-Marconi100_small_benchmark_run_to_test_more_complex_Earth-xl-spectrumpi-mpirun-GPU_DEVICE-star-%j.out
+#SBATCH --gres=gpu:4        # 1 gpus per node out of 4
+##SBATCH --hint=nomultithread
+#SBATCH --exclusive
+#SBATCH --mem=246000          # memory per node out of 246000MB
+
+#set -e
+source ../env/env_marconi100
+echo "Environment used:"
+echo "================="
+grep -E -v '^(#|$)' ../env/env_marconi100
+cat job_marconi100_small_benchmark_run_to_test_more_complex_Earth.slurm
+cd $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth
+export CUDA_VISIBLE_DEVICES=0,1,2,3
+
+# Uncomment the 3-5 following lines if it's first time launched after the compilation:
+sed -i s/"GPU_MODE                        = .false."/"GPU_MODE                        = .true."/g  $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/DATA/Par_file
+sed -i s/"GPU_DEVICE                      = Tesla"/"GPU_DEVICE                      = *"/g  $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/DATA/Par_file
+sed -i s/"configure  --enable-openmp"/"configure  --build=ppc64 --with-cuda=cuda8"/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_this_example.sh
+#sed -i s/"mpirun -np"/"srun -n"/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_mesher_solver.bash
+sed -i s/"mpirun -np"/"mpirun -gpu -np"/g $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_mesher_solver.bash
+sed -i '38d' $install_dir/specfem3d_globe/Makefile
+grep configure $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_this_example.sh
+
+#export OMP_NUM_THREADS=1 # $SLURM_CPUS_PER_TASK
+ulimit -s unlimited
+sed -i '40 i sed -i s/"O4"/"O3"/g Makefile' $install_dir/specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/run_this_example.sh
+time ./run_this_example.sh
+grep GPU $install_dir/specfem3d_globe/DATA/Par_file
+
+echo "=========="
+echo "config.log"
+echo "=========="
+cat $install_dir/specfem3d_globe/config.log
+echo "========"
+echo "make.log"
+echo "========"
+cat $install_dir/specfem3d_globe/make.log
+
+echo "running seismogram comparisons:"
+echo
+
+cd $install_dir/specfem3d_globe/
+# uncompress seismograms
+if [ -e EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES_reference_OK/II.AAK.MXE.sem.ascii.bz2 ]; then
+  echo
+  echo "unzipping references..."
+  echo
+  mkdir OUTPUT_FILES_reference_OK/
+  bunzip2 EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES_reference_OK/*.bz2
+  echo
+  echo
+fi
+
+# compares seismograms by plotting correlations
+# Python2 (2.7 -virtual env - numpy)
+source /m100/home/userexternal/cjourdai/numpy-test/bin/activate
+which python
+./utils/compare_seismogram_correlations.py EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES/ EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES_reference_OK/
+
+echo
+echo "done"
+echo
+echo "========"
+cat $install_dir//specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES/output_solver.txt
+echo "========"
+cat $install_dir//specfem3d_globe/EXAMPLES/small_benchmark_run_to_test_more_complex_Earth/OUTPUT_FILES/output_mesher.txt